Publications

Year 1

  • Bernhard Kainz, Philip Voglreiter, Michael Sereinigg, Iris Wiederstein-Grasser, Ursula Mayrhauser, Sonja Köstenbauer, Mika Pollari, Rostislav Khlebnikov, Matthias Seise, Tuomas Alhonnoro, Yrjö Häme, Daniel Seider, Ronan Flanagan, Claire Bost, Judith Mühl, David O'Neill, Tingying Peng, Stephen Payne, Daniel Rueckert, Dieter Schmalstieg, Marina Kolesnik, Philipp Stiegler, and Rupert H. Portugaller. High-Resolution Contrast Enhanced Multi-Phase Hepatic Computed Tomography Data from a Porcine Radio-Frequency Ablation Study. Biomedical Imaging (ISBI), 2014 IEEE 11th International Symposium on , vol., no., pp.81,84, April 29 2014-May 2 2014.
  • Philip Voglreiter, Markus Steinberger, Bernhard Kainz, Rostislav Khlebnikov, and Dieter Schmalstieg. Dynamic GPU Scheduling for Volume Rendering. In Proceedings of IEEE Scientific Visualization 2013, Atlanta, GA, USA, October 2013. Best poster honorable mention for IEEE SciVis 2013. Paper   Poster
  • Rostislav Khlebnikov, Philip Voglreiter, Markus Steinberger, Bernhard Kainz, and Dieter Schmalstieg EG EuroVis 2014, Swansea, Wales, June 2014. Parallel Irradiance Caching for Interactive Monte-Carlo Direct Volume Rendering. In Computer Graphics Forum, vol. 33, no. 3, pp. 61-70. 2014. Paper   Supplemental

Year 2

  • Hall SK, Ooi EH, Payne SJ. A Mathematical Framework for Minimally Invasive Tumor Ablation Therapies. Crit Rev Biomed Eng. Begel House Inc.; 2014; 42(5):383-417.
  • Hall SK, Ooi EH, Payne SJ. Cell death, perfusion and electrical parameters are critical in models of hepatic radiofrequency ablation. International Journal of Hyperthermia. Informa Healthcare; 2015.
  • C. Liu and S.J. Payne. Mathematical Modelling of Cellular Oedema in Response to Thermal Ablation. 4th International Conference on Computational & Mathematical Biomedical Engineering. Paris, 2015.
  • Sheldon K. Hall, Stephanie Brunet and Stephen J. Payne. A Model of Tissue Movement During Microwave Ablation. 4th International Conference on Computational & Mathematical Biomedical Engineering. Paris, 2015.
  • J. Egger. Refinement-Cut: User-Guided Segmentation Algorithm for Translational Science. Scientific Reports 4, Article number: 5164, Nature Publishing Group, June 2014. Paper.
  • H. Busse, M. Moche, P. Brandmaier, M. Gawlitza, S. Strocka, T. Kahn, D. Schmalstieg, J. Egger. Novel Semiautomatic Real-time CT Segmentation Tool and Preliminary Clinical Evaluation on Thermally Induced Lesions in the Liver. Radiological Society of North America 2014 Scientific Assembly and Annual Meeting, November 30 - December 5, 2014, Chicago IL. Abstract .
  • J. Egger, H. Busse, M. Moche, P. Brandmaier, D. Seider, M. Gawlitza, S. Strocka, N. Garnov, J. Fuchs, P. Voigt, F. Dazinger, P. Voglreiter, M. Dokter, M. Hofmann, A. Hann, B. Freisleben, T. Kahn, D. Schmalstieg. Semi-automatic Segmentation of Ablation zones in post-interventional CT Data. In: Proceedings of Bildverarbeitung für die Medizin (BVM), Springer Press, pp. 281-286, Lübeck, Germany, March 2015.
  • X. Chen, L. Xu, Y. Wang, H. Wang, F. Wang, X. Zeng, Q. Wang, J. Egger. Development of a Surgical Navigation System based on Augmented Reality using an Optical see-through Head-mounted Display. Journal Biomed. Inform. April 2015
  • Voigt P, Fuchs J, Petersen TO, Flanagan R, Pollari M, Payne, Fütterer J, Portugaller H, Fischer S, Zangos S, Kahn T, Kolesnik M, Moche M. The development of a simulation tool for the clinical use in image guided percutaneous tumor ablations - the Go-Smart project. 96th German Röntgenkongress. Hamburg, Germany. 2015 [accepted for oral presentation].
  • Voigt P et al. Percutaneos and intraoperative irreversible electroporation of liver cancer - a monocenter experience. 101st scientific assembly and annual RSNA meeting. Chicago, USA. 2015 [abstract for oral presentation - pending review]
  • Voigt P et al. Percutaneous and intraoperative IRE in clinical use - preliminary experience with main focus on liver. International Course - Electroporation for medicine: basic knowledge, applications and technology. Bucharest, Romania. 2015 [invited oral presentation].
  • T.J. van Oostenbrugge, J.F. Langenhuijsen, S.F.M. Jenniskens, P.F.A. Mulders, J.J. Fütterer. Percutaneous 3T MR-guided cryoablation of small renal masses: initial experience. 8th International Symposium on Focal Therapy and Imaging in prostate and kidney cancer. Noordwijk, the Netherlands, 2015 [abstract for oral presentation - pending review].
  • Hans Langenhuijsen, Frank D'Ancona, Arnauld Villers, Jurgen Fütterer. Multidisciplinary session on intervention radiology and minimal invasive urology. Anniversary Symposium 11 September 2015: Personalized Cure and Care in Urology, 50 Years of Academic Urology in Nijmegen. Nijmegen, the Netherlands, 2015 [invited oral presentation].
  • T.J. van Oostenbrugge, W.J.G. Oyen, O.C. Boerman, S.F.M. Jenniskens, J.F. Langenhuijsen, P.F.A. Mulders, J.J. Fütterer. Follow up After Percutaneous MR-guided Cryoablation of Small Renal Masses. [ongoing clinical trial, ClinicalTrials.gov Identifier: NCT02411968].

Year 3

  • Schnedl, C; Kalmar, PI; Weir, P; Kolesnik, M; van Oostenbrugge, T; Moche, M; Deutschmann, HA; Portugaller, RH; Stiegler, P. A web-based and user friendly planning tool to predict outcome for percutaneous microwave ablation of liver tumors including validation of the simulation model. EPOS - Electronic Presentation Online System.. 2016; -European Congress of Radiology; MAR 2-7, 2016; Vienna, AUSTRIA.
  • Voglreiter, P., Hofmann, M., Ebner, C., Blanco Sequeiros, R., Portugaller, H.R., Futterer, J., Moche, M., Steinberger, M., Schmalstieg, D. Visualization-Guided Evaluation of Simulated Minimally Invasive Cancer Treatment. In Proceedings of Visual Computing for Biology and Medicine. Bergen, 2016
  • Kos B, Voigt P, Miklavcic D, Moche M. Careful treatment planning enables safe ablation of liver tumors adjacent to major blood vessels by percutaneous irreversible electroporation (IRE). Radiol Oncol 2015. 49(3):234-41.
  • Moche M, Fuchs J, Petersen TO, Jantschke R, Bartels M, Kahn T, Voigt P. Percutaneous and intraoperative irreversible electroporation of liver cancer – a monocenter experience. IFMBE proceedings 2015. 53:252-5.
  • Egger J, Busse H, Brandmaier P, Seider D, Gawlitza M, Strocka S, Voglreiter P, Dokter M, Hofmann M, Kainz B, Hann A, Chen X, Alhonnoro T, Pollari M, Schmalstieg D, Moche M. Interactive Volumetry Of Liver Ablation Zones. Sci Rep. 2015 Oct 20;5:15373. doi: 10.1038/srep15373.
  • Hall, S.K., Ooi, E.H. and Payne, S.J. A mathematical framework for minimally invasive cancer treatments. Critical Reviews in Biomedical Engineering, 2014; 42(5):383–417, Begel House Inc.
  • Hall SK, Ooi EH, Payne SJ. Cell death, perfusion and electrical parameters are critical in models of hepatic radiofrequency ablation. International Journal of Hyperthermia. Informa Healthcare; 2015.
  • C. Liu and S.J. Payne. Mathematical Modelling of Cellular Oedema in Response to Thermal Ablation. 4th International Conference on Computational & Mathematical Biomedical Engineering. Paris, 2015.
  • Sheldon K. Hall, Stephanie Brunet and Stephen J. Payne. A Model of Tissue Movement During Microwave Ablation. 4th International Conference on Computational & Mathematical Biomedical Engineering. Paris, 2015.
  • Park, C.S., Hall, S.K., Liu, C. and Payne, S.J. A model of tissue contraction during thermal ablation. Physiological Measurement, in press.
  • Liu, C., Park, C.S., Hall, S.K. and Payne,S.J. Mathematical model of the post-ablation enhancement zone as a tissue-level oedematic response. International Journal of Hyperthermia, in press.
  • J. Egger. Refinement-Cut: User-Guided Segmentation Algorithm for Translational Science. Scientific Reports 4, Article number: 5164, Nature Publishing Group, June 2014. http://www.nature.com/srep/2014/140604/srep05164/full/srep05164.html.
  • H. Busse, M. Moche, P. Brandmaier, M. Gawlitza, S. Strocka, T. Kahn, D. Schmalstieg, J. Egger. Novel Semiautomatic Real-time CT Segmentation Tool and Preliminary Clinical Evaluation on Thermally Induced Lesions in the Liver. Radiological Society of North America 2014 Scientific Assembly and Annual Meeting, November 30 - December 5, 2014, Chicago IL. rsna2014.rsna.org/program/details/?emID=14017499.
  • J. Egger, H. Busse, M. Moche, P. Brandmaier, D. Seider, M. Gawlitza, S. Strocka, N. Garnov, J. Fuchs, P. Voigt, F. Dazinger, P. Voglreiter, M. Dokter, M. Hofmann, A. Hann, B. Freisleben, T. Kahn, D. Schmalstieg. Semi-automatic Segmentation of Ablation zones in post-interventional CT Data. In: Proceedings of Bildverarbeitung für die Medizin (BVM), Springer Press, pp. 281-286, Lübeck, Germany, March 2015.
  • X. Chen, L. Xu, Y. Wang, H. Wang, F. Wang, X. Zeng, Q. Wang, J. Egger. Development of a Surgical Navigation System based on Augmented Reality using an Optical see-through Head-mounted Display. Journal Biomed. Inform. April 2015
  • Voigt P, Fuchs J, Petersen TO, Flanagan R, Pollari M, Payne, Fütterer J, Portugaller H, Fischer S, Zangos S, Kahn T, Kolesnik M, Moche M. The development of a simulation tool for the clinical use in image guided percutaneous tumor ablations – the Go-Smart project. 96 th German Röntgenkongress. Hamburg, Germany. 2015 [oral presentation].
  • Voigt P et al. Percutaneos and intraoperative irreversible electroporation of liver cancer – a monocenter experience. 101 st scientific assembly and annual RSNA meeting. Chicago, USA. 2015 [abstract for oral presentation]
  • Voigt P et al. Percutaneous and intraoperative IRE in clinical use - preliminary experience with main focus on liver. International Course – Electroporation for medicine: basic knowledge, applications and technology. Bucharest, Romania. 2015 [invited oral presentation].
  • T.J. van Oostenbrugge, J.F. Langenhuijsen, S.F.M. Jenniskens, P.F.A. Mulders, J.J. Fütterer. Percutaneous 3T MR-guided cryoablation of small renal masses: initial experience. 8th International Symposium on Focal Therapy and Imaging in prostate and kidney cancer. Noordwijk, the Netherlands, 2015 [abstract for oral presentation - pending review].
  • Phil Weir, Dominic Reuter, Roland Ellerweg, Tuomas Alhonnoroz, Mika Pollari, Philip Voglreiter, Panchatcharam Mariappan, Ronan Flanagan, Chang Sub Park, Stephen Payne, Elmar Staerk, Peter Voigt, Michael Moche, and Marina Kolesnik. Go-Smart: Web-based Computational Modeling of Minimally Invasive Cancer Treatments, ID 139, submitted to EHB 2015 conference, Iasi, Romania
  • P. Weir, R. Ellerweg, J. S. Hale. Orchestrating clinical simulation with FEniCS, Scientific congresses, symposiums and conference proceedings, FEniCS Conference 2016. Oslo, Norway. May 2016 [abstract for poster presentation]
  • P. Weir, P. Mariappan, R. Ellerweg. Glossia & FEniCS: Simulation orchestration for Pyhton, FEniCS Conference 2016. Oslo. Norway. May 2016 [abstract for poster presentation]
  • P. Weir, P. Mariappan, R. Ellerweg, R. Flanagan, M. Kolesnik. Go-Smart Glossia: A tool to separate web-user, manufacture and researcher concerns through extensible simulation containerization. ESCO 2016, Pilzen, Czech Republic. June 2016 [abstract for poster presentation]
  • Hans Langenhuijsen, Frank D'Ancona, Arnauld Villers, Jurgen Fütterer. Multidisciplinary session on intervention radiology and minimal invasive urology. Anniversary Symposium 11 September 2015: Personalized Cure and Care in Urology, 50 Years of Academic Urology in Nijmegen. Nijmegen, the Netherlands, 2015 [invited oral presentation].
  • T.J. van Oostenbrugge, W.J.G. Oyen, O.C. Boerman, S.F.M. Jenniskens, J.F. Langenhuijsen, P.F.A. Mulders, J.J. Fütterer. Follow up After Percutaneous MR-guided Cryoablation of Small Renal Masses. [ongoing clinical trial, ClinicalTrials.gov Identifier: NCT02411968].